Package: forensIT 1.0.0

forensIT: Information Theory Tools for Forensic Analysis

The 'forensIT' package is a comprehensive statistical toolkit tailored for handling missing person cases. By leveraging information theory metrics, it enables accurate assessment of kinship, particularly when limited genetic evidence is available. With a focus on optimizing statistical power, 'forensIT' empowers investigators to effectively prioritize family members, enhancing the reliability and efficiency of missing person investigations.

Authors:Franco Marsico [aut, cre], Ariel Chernomoretz [aut]

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forensIT.pdf |forensIT.html✨
forensIT/json (API)

# Install 'forensIT' in R:

install.packages('forensIT', repos = c('https://marsicofl.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

simME - SimME: output from simMinimalEnsemble considering an uncle

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.70 score 1 scripts 175 downloads 26 exports 154 dependencies

Last updated 1 years agofrom:bd0fb0bbea. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 14 2024
R-4.5-win	OK	Nov 14 2024
R-4.5-linux	OK	Nov 14 2024
R-4.4-win	OK	Nov 14 2024
R-4.4-mac	OK	Nov 14 2024
R-4.3-win	OK	Nov 14 2024
R-4.3-mac	OK	Nov 14 2024

Exports:buildEnsembleCPTs buildEnsembleITValues compareBnetPopGenoPDFs convertPed crossH distKL elimLangeGoradia exportPed genotypeProbs genotypeProbTable genotypeProbTable_bis getAllelesFromGenotypes H index2Genotypes2 index2Genotypes2.pedtools KLd KLde perMarkerKLs plotKL Px simLR simMinimalEnsemble simTestIDMarkers strsplit2 trioCheckFast unidimKLplot

Dependencies:askpass assertthat backports base64enc bit bit64 blob broom bslib cachem callr cellranger cli clipr codetools colorspace commonmark conflicted cpp11 crayon curl data.table DBI dbplyr digest DirichletReg doParallel dplyr dtplyr evaluate extrafont extrafontdb fansi farver fastmap fbnet fontawesome fontBitstreamVera fontLiberation fontquiver forcats foreach Formula forrel fs gargle gdtools generics ggplot2 glue googledrive googlesheets4 gtable gtools haven highr hms hrbrthemes htmltools httpuv httr ids igraph isoband iterators jquerylib jsonlite kinship2 knitr labeling later lattice lifecycle lubridate magrittr MASS Matrix maxLik memoise mgcv mime miscTools mispitools modelr munsell nlme openssl paramlink patchwork pbapply pedFamilias pedmut pedprobr pedtools pillar pkgconfig plyr prettyunits processx progress promises ps purrr quadprog R6 ragg rappdirs RColorBrewer Rcpp readr readxl rematch rematch2 reprex reshape2 ribd rlang rmarkdown Rsolnp rstudioapi Rttf2pt1 rvest sandwich sass scales selectr shiny slam sourcetools stringi stringr sys systemfonts textshaping tibble tidyr tidyselect tidyverse timechange tinytex truncnorm tzdb utf8 uuid vctrs verbalisr viridisLite vroom withr xfun xml2 xtable yaml zoo

Help page	Topics
buildEnsembleCPTs	buildEnsembleCPTs
buildEnsembleITValues	buildEnsembleITValues
Compare population and Bayesian network genotype probability density functions # nolint	compareBnetPopGenoPDFs
Convert a pedigree to a paramlink object	convertPed
Cross entropy	crossH
distKL: KL distribution obtained for specific relative contributor	distKL
Eliminate Mendelian errors using Lange-Goradia algorithm	elimLangeGoradia
Export a pedigree to a file	exportPed
forensIT: Information Theory Tools for Forensic Analysis	forensIT
Genotype probabilities	genotypeProbs
Genotype Probability Table	genotypeProbTable
genotypeProbTable_bis	genotypeProbTable_bis
getAllelesFromGenotypes	getAllelesFromGenotypes
Entropy of a discrete probability distribution	H
index2Genotypes2	index2Genotypes2
index2Genotypes	index2Genotypes2.pedtools
KL divergence	KLd
KL divergence	KLde
perMarkerKLs	perMarkerKLs
Plot KL distances.	plotKL
Px	Px
runIT	runIT
Simulate LR	simLR
simME: output from simMinimalEnsemble considering an uncle	simME
simMinimalEnsemble	simMinimalEnsemble
Simulate testID markers	simTestIDMarkers
strsplit2	strsplit2
trioCheckFast	trioCheckFast
unidimKLplot: KL distributions presented in the same units (Log10(LR))	unidimKLplot

Package: forensIT 1.0.0

forensIT: Information Theory Tools for Forensic Analysis

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)